Published Papers - SUGIMOTO Naoki

Small-molecule-directed assembly of DNA: a gold-nanoparticle-based strategy for screening of a DNA duplex binders

G. Song, C. Chen, X. Qu, D. Miyoshi, J. Ren and N. Sugimoto

Adv. Mater.   20   706 - 710   2008.01

Joint Work

Structural effect of synthetic zwitterionic cosolutes on the stability of DNA duplexes

K. Koumoto, H. Ochiai and N. Sugimoto

Tetrahedron   64   168 - 174   2008.01

Joint Work

Conformation and the sodium ion condensation on DNA and RNA structures in the presence of a neutral cosolute as a mimic of the intracellular media

S. Nakano, L. Wu, H. Oka, H. Tateishi-Karimata, T. Kirihata, Y. Sato, S. Fujii, H. Sakai, M. Kuwahara, H. Sawai and N. Sugimoto

Mol. Biosys.   4   579 - 588   2008

Joint Work

Regulation of Telomerase Activity by the Thermodynamic Stability of a DNA?RNA Hybrid

N. Sugimoto

Angew. Chem. Int. Ed. Engl.   47   9034 - 9038   2008

Single Work

DOI

Synthesis, structure and thermal stability of fully hydrophobic porphyrin-DNA conjugates

T. Murashima, K. Hayata, Y. Saiki, J. Matsui, D. Miyoshi, T. Yamada, T. Miyazawa and N. Sugimoto

Tetrahedron Lett.   48   8514 - 8517   2007.11

Joint Work

Consecutive GC base pairs determine the energy barrier of DNA duplex formation under molecularly crowded conditions

X.B. Gu, S. Nakano and N. Sugimoto

Chem. Commun.     2750 - 2752   2007.07

Joint Work

Regulation of DNA nucleases by molecular crowding

Y. Sasaki, D. Miyoshi and N. Sugimoto

Nucleic Acids Res.   35   4086 - 4093   2007.06

Joint Work

Hydration regulates thermodynamic stability of DNA structures under molecular crowding conditions

D. Miyoshi, H. Karimata and N. Sugimoto

Nucleosides Nucleotides Nucleic Acids   26   589 - 595   2007.06

Joint Work

Artificial G-wire Switch with 2,2’-Bipyridine Units Responsive to Divalent Metal Ions

D. Miyoshi, H. Karimata, Z.M. Wang, K. Koumoto and N. Sugimoto

J. Am. Chem. Soc.   129   5919 - 5925   2007.04

Joint Work

Effects of polyethylene glycol on a DNA duplex stability differed by the NaCl concentration

H. Karimata, S. Nakano and N. Sugimoto

Bull. Chem. Soc. Jpn.   80   1987 - 1994   2007.04

Joint Work

Molecular Imprinting Under Molecular Crowding Conditions: an Aid to the synthesis of a High-capacity Polymeric Sorbent for Triazine Herbicides

J. Matsui, S. Goji, T. Murashima, D. Miyoshi, S. Komai, A. Shigeyasu, T. Kushida, T. Miyazawa, T. Yamada, K. Tamaki and N. Sugimoto

Anal. Chem.   79   1749 - 1757   2007.02

Joint Work

Influence of cationic molecules on the hairpin to duplex equilibria of self-complementary DNA and RNA oligonucleotides

S. Nakano, T. Kirihata, S. Fujii, H. Sakai, M. Kuwahara, H. Sawai and N. Sugimoto

Nucleic Acids Res.   35   486 - 494   2007.01

Joint Work

Characterization of Structure and Stability of Long Telomeric DNA G-Quadruplexes

H.Q. Yu, D. Miyoshi and N. Sugimoto

J. Am. Chem. Soc.   128   15461 - 15468   2006.11

Joint Work

Hydration regulates thermodynamics of G-quadruplex formation under molecular crowding conditions

杉本　直己

J. Am. Chem. Soc., 128     7957 - 7963   2006.11

Single Work

A novel stable RNA pentaloop that interacts specifically with a motif peptide of lambda-N protein

J. Kawakami, H. Tokitoh, Y. Tanabe and N. Sugimoto

Nucleosides Nucleotides Nucleic Acids   25   397 - 416   2006.11

Joint Work

DNA logic gates based on structural polymorphism of telomere DNAs responding to chemical input signals

D. Miyoshi, M. Inoue and N. Sugimoto

Angew. Chem. Int. Ed.   45   7716 - 7719   2006.11

Joint Work

Molecularly-Imprinted Polymeric Logic Gates Selective for Predetermined Chemical Input Species

J. Matsui, T. Sodeyama, K. Tamaki and N. Sugimoto

Chem. Comm.   14   3217 - 3219   2006

Joint Work

A DNA duplex with Extremely Enhanced Thermal Stability Based on Controlled Immobilization on Gold Nanoparticles

K. Akamatsu, M. Kimura, Y. Shibata, S. Nakano, D. Miyoshi, H. Nawafune and N. Sugimoto

Nano Lett.   6   491 - 495   2006

Joint Work

Effect of molecular crowding on DNA polymerase activity

Y. Sasaki, D. Miyoshi and N. Sugimoto

Biotech. J.   1   440 - 446   2006

Joint Work

DNA base flipping by a base pair-mimic nucleoside

S. Nakano, Y. Uotani, K. Uenishi, M. Fujii and N. Sugimoto

Nucleic Acids Res.   33   7111 - 7119   2005.11

Joint Work