Papers - SUGIMOTO Naoki
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Improved nearest-neighbor parameters for the stability of RNA/DNA hybrids under a physiological condition Reviewed International journal
D. Banerjee, H. Tateishi-Karimata, T. Ohyama, S. Ghosh, T. Endoh, S. Takahashi, and N. Sugimoto
Nucleic Acids Research 48 ( 21 ) 12042 - 12054 2020.7
Joint Work
[Selected as a Cover]
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Nearest-neighbor parameters for predicting DNA duplex stability in diverse molecular crowding conditions Reviewed International journal
S. Ghosh, S. Takahashi, T. Ohyama, T. Endoh, H. Tateishi-Karimata, and N. Sugimoto
Proceedings of the National Academy of Sciences of the United States of America 117 ( 25 ) 14194 - 14201 2020.6
Joint Work
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Signaling Aptamer Optimization through Selection Using RNA-Capturing Microsphere Particles Reviewed International journal
T. Endoh and N. Sugimoto
Analytical Chemistry 92 ( 11 ) 7955 - 7963 2020.6
Joint Work
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RNA G-quadruplexes facilitate RNA accumulation in G-rich repeat expansions Reviewed International journal
Y. Teng, H. Tateishi-Karimata, and N. Sugimoto
Biochemistry 59 ( 21 ) 1972 - 1980 2020.6
Joint Work
[Selected as a Front Cover]
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Preferential targeting cancer-related i-motif DNAs by the plant flavonol fisetin for theranostics applications International coauthorship International journal
S. Takahashi, S. Bhattachargee, S. Ghosh, N. Sugimoto, and S. Bhowmik
Sci. Rep. 10 2504 2020
Joint Work
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Hydroxyl groups in cosolutes regulate the G-quadruplex topology of telomeric DNA Reviewed International journal
H. Tateishi-Karimata, D. Banerjiee, T. Ohyama, S. Matsumoto, D. Miyoshi, S. Nakano, and N. Sugimoto
Biochem.Biophys. Res. Commun 525 ( 1 ) 177 - 183 2020
Joint Work
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Thrombin binding aptamer G-quadruplex stabilized by pyrene-modified nucleotides Reviewed International journal
M. Kovačič, P. Podbevšek, H. Tateishi-Karimata, S. Takahashi, N. Sugimoto , J. Plavec
Nucleic Acids Res 48 ( 7 ) 3975 - 3986 2020
Joint Work
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New Modified Deoxythymine with Dibranched Tetraethylene Glycol Stabilizes G-Quadruplex Structures Reviewed International journal
H. Tateishi-Karimata, T. Ohyama, T. Muraoka, S. Tanaka, K. Kinbara, and N. Sugimoto
Molecules 25 ( 3 ) 705 2020
Joint Work
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Effect of Potassium Concentration on Triplex Stability under Molecular Crowding Conditions Reviewed International journal
Y. Teng, H. Tateishi-Karimata, T. Ohyama, and N. Sugimoto
Molecules 25 ( 2 ) 387 2020
Joint Work
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Bulky cations greatly increase the turnover of a native hammerhead ribozyme
S. Nakano, H. Yamashita, K. Tanabe, and N. Sugimoto
Royal Society of Chemistry ９ ( 61 ) 35820 - 35824 2019.11
DOI： 10.1039/c9ra06797c
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Stabilization of DNA Loop Structures by Large Cations Reviewed International journal
S. Nakano, T. Ayusawa, Y. Tanino, and N. Sugimoto
J Phys Chem B. 123 7687 - 7694 2019.9
Joint Work
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Conformational Dynamics of the RNA G-Quadruplex and its Effect on Translation Efficiency Reviewed International journal
T. Endoh and N. Sugimoto
Molecules 24 1613 2019.4
Joint Work
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RNA-capturing microsphere particles (R-CAMPs) for optimization of functional aptamers Reviewed International journal
T. Endoh, T. Ohyama, and N. Sugimoto
Small 15 1805062 2019.4
Joint Work
[Selected as an Inside Back Cover]
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Characterization of intracellular crowding environments with topology-based DNA quadruplex sensors Reviewed International journal
S. Takahashi, J. Yamamoto, A. Kitamura, M. Kinjo, and N. Sugimoto
Anal. Chem. 91 2586 - 2590 2019.2
Joint Work
[Selected as a Supplementary Cover]
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C-rich sequence in a non-template DNA strand regulates structure change of G-quadruplex in a template strand during transcription Reviewed International journal
Y. Teng, H. Tateishi-Karimata, and N. Sugimoto
Bull. Chem. Soc. Jpn. 92 ( 3 ) 527 - 577 2019
Joint Work
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Lighting up of thiazole orange on G-quadruplex DNA by high pressure Reviewed International coauthorship International journal
S. Bhowmik, S. Takahashi, and N. Sugimoto
ACS Omega 4 4325 - 4329 2019
Joint Work
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Bisubstrate function of RNA polymerases triggered by molecular crowding conditions Reviewed International journal
S. Takahashi, H. Okura, and N. Sugimoto
Biochemistry 58 1081 - 1093 2019
Joint Work
[Selected as a Supplementary Cover]
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Validation of the Nearest-neighbor Model for Watson–Crick Self-complementary DNA Duplexes in Molecular Crowding Condition Reviewed International journal
S. Ghosh, S. Takahashi, T. Endoh, H. Tateishi-Karimata, S. Hazra, and N. Sugimoto
Nucleic Acids Res. 47 3284 - 3294 2019
Joint Work
[Selected as a Cover]
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In situ condensation of an anti-cancer drug into fibrin gel enabling effective inhibition of tumor cell growth Reviewed International journal
M. Kuwahara, H. Fujita, Y. Kataoka, Y. Nakajima, M. Yamada, and N. Sugimoto
Chem Commun (Camb) 55 11679 - 11682 2019
Joint Work
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Design and Properties of Ligand-Conjugated Guanine Oligonucleotides for Recovery of Mutated G-Quadruplexes Reviewed International coauthorship International journal
S. Takahashi, B. Chelobanov, K. T. Kim, B. H. Kim, D. Stetsenko, and N. Sugimoto
Molecules 23 3228 2018.12
Joint Work