Papers - SUGIMOTO Naoki
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Artificial turn-on riboswitch to control target gene expression using a wild-type riboswitch splicing mechanism Reviewed International journal
T. Yamauchi, T. Kubodera, D. Miyoshi, N. Sugimoto, and S. Hirohata
Journal of Bioscience and Bioengineering 131 115 - 123 2021.2
Joint Work
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Combined Effects of Methylated Cytosine and Molecular Crowding on the Thermodynamic Stability of DNA Duplexes Reviewed International journal
M. Tsuruta, Y. Sugitani, N. Sugimoto, D. Miyoshi
Int. J. Mol. Sci., 22 947 2021.1
Joint Work
DOI： 10.3390/ijms22020947
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Engineering exosome polymer hybrids by atom transfer radical polymerization Reviewed International coauthorship International journal
S. Lathwal, S. S. Yerneni, S. Boye, U. L. Muza, S. Takahashi, N. Sugimoto, A. Lederer, S. R. Das, P. G. Campbell, K. Matyjaszewski
Proc. Natl. Acad. Sci. U. S. A., 118 e2020241118 2021.1
Joint Work
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Effects of Modifying Thioflavin T at the N3-Position on Its G4 Binding and Fluorescence Emission Reviewed International journal
Y. Kataoka, H. Fujita, T. Endoh, N. Sugimoto, and M. Kuwahara
Molecules 25 ( 21 ) 4936 2020.10
Joint Work
Publisher：MDPI
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Effect of Molecular Crowding on DNA Polymerase Reactions along Unnatural DNA Templates Reviewed International coauthorship International journal
S. Takahashi, P. Herdwijn, and N. Sugimoto
Molecules 25 ( 18 ) 4120 2020.9
Joint Work
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Molecular crowding induces primer extension by RNA polymerase through base stacking beyond Watson–Crick rules Reviewed International journal
S. Takahashi, H. Okura, P. Chilika, S. Ghosh, and N. Sugimoto
RSC Advances 10 33052 - 33058 2020.9
Joint Work
[Selected as a HOT Article]
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Effect of molecular crowding on the stability of RNA G-quadruplexes with various numbers of quartets and lengths of loops Reviewed International journal
S. Matsumoto, H. Takeishi-Karimata, S. Takahashi, T. Ohyama, and N. Sugimoto
Biochemistry 59 ( 28 ) 2640 - 2649 2020.7
Joint Work
[Selected as a Supplemental Cover]
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Improved nearest-neighbor parameters for the stability of RNA/DNA hybrids under a physiological condition Reviewed International journal
D. Banerjee, H. Tateishi-Karimata, T. Ohyama, S. Ghosh, T. Endoh, S. Takahashi, and N. Sugimoto
Nucleic Acids Research 48 ( 21 ) 12042 - 12054 2020.7
Joint Work
[Selected as a Cover]
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Nearest-neighbor parameters for predicting DNA duplex stability in diverse molecular crowding conditions Reviewed International journal
S. Ghosh, S. Takahashi, T. Ohyama, T. Endoh, H. Tateishi-Karimata, and N. Sugimoto
Proceedings of the National Academy of Sciences of the United States of America 117 ( 25 ) 14194 - 14201 2020.6
Joint Work
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Signaling Aptamer Optimization through Selection Using RNA-Capturing Microsphere Particles Reviewed International journal
T. Endoh and N. Sugimoto
Analytical Chemistry 92 ( 11 ) 7955 - 7963 2020.6
Joint Work
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RNA G-quadruplexes facilitate RNA accumulation in G-rich repeat expansions Reviewed International journal
Y. Teng, H. Tateishi-Karimata, and N. Sugimoto
Biochemistry 59 ( 21 ) 1972 - 1980 2020.6
Joint Work
[Selected as a Front Cover]
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Preferential targeting cancer-related i-motif DNAs by the plant flavonol fisetin for theranostics applications International coauthorship International journal
S. Takahashi, S. Bhattachargee, S. Ghosh, N. Sugimoto, and S. Bhowmik
Sci. Rep. 10 2504 2020
Joint Work
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Hydroxyl groups in cosolutes regulate the G-quadruplex topology of telomeric DNA Reviewed International journal
H. Tateishi-Karimata, D. Banerjiee, T. Ohyama, S. Matsumoto, D. Miyoshi, S. Nakano, and N. Sugimoto
Biochem.Biophys. Res. Commun 525 ( 1 ) 177 - 183 2020
Joint Work
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Thrombin binding aptamer G-quadruplex stabilized by pyrene-modified nucleotides Reviewed International journal
M. Kovačič, P. Podbevšek, H. Tateishi-Karimata, S. Takahashi, N. Sugimoto , J. Plavec
Nucleic Acids Res 48 ( 7 ) 3975 - 3986 2020
Joint Work
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New Modified Deoxythymine with Dibranched Tetraethylene Glycol Stabilizes G-Quadruplex Structures Reviewed International journal
H. Tateishi-Karimata, T. Ohyama, T. Muraoka, S. Tanaka, K. Kinbara, and N. Sugimoto
Molecules 25 ( 3 ) 705 2020
Joint Work
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Effect of Potassium Concentration on Triplex Stability under Molecular Crowding Conditions Reviewed International journal
Y. Teng, H. Tateishi-Karimata, T. Ohyama, and N. Sugimoto
Molecules 25 ( 2 ) 387 2020
Joint Work
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Bulky cations greatly increase the turnover of a native hammerhead ribozyme
S. Nakano, H. Yamashita, K. Tanabe, and N. Sugimoto
Royal Society of Chemistry ９ ( 61 ) 35820 - 35824 2019.11
DOI： 10.1039/c9ra06797c
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Stabilization of DNA Loop Structures by Large Cations Reviewed International journal
S. Nakano, T. Ayusawa, Y. Tanino, and N. Sugimoto
J Phys Chem B. 123 7687 - 7694 2019.9
Joint Work
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Conformational Dynamics of the RNA G-Quadruplex and its Effect on Translation Efficiency Reviewed International journal
T. Endoh and N. Sugimoto
Molecules 24 1613 2019.4
Joint Work
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RNA-capturing microsphere particles (R-CAMPs) for optimization of functional aptamers Reviewed International journal
T. Endoh, T. Ohyama, and N. Sugimoto
Small 15 1805062 2019.4
Joint Work
[Selected as an Inside Back Cover]