Papers - SUGIMOTO Naoki
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Specific Light-Up System for Protein and Metabolite Targets Triggered by Initiation Complex Formation Reviewed International journal
H. Fujita, Y. Kataoka, R. Nagano, Y. Nakajima, M. Yamada, N. Sugimo, M. Kuwahara
Sci. Rep. 7 ( 15191 ) 2017
Joint Work
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Effects of trimethylamine N-oxide and urea on DNA duplex and G-quadruplex Reviewed International journal
Y. Ueda, Y. Zouzumi, A. Maruyama, S. Nakano, N. Sugimoto and D. Miyoshi
Science and Technology of Advanced Materials 17 753 - 759 2016.11
Joint Work
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tRNA Shifts the G-quadruplex-hairpin conformational equilibrium in RNA towards the hairpin conformer [Selected as an Inside Back Cover] Reviewed International journal
A.B. Rode, T. Endoh, N. Sugimoto
Angew. Chem. Int. Ed. 46 14315 - 14319 2016.11
Joint Work
Authorship：Lead author
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Thermal stability of RNA structures with bulky cations in mixed aqueous solutions Reviewed International journal
S. Nakano, Y. Tanino, H. Hirayama, N. Sugimoto
Biophysical Journal 111 1350 - 1360 2016.10
Joint Work
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G-quadruplexes with tetraethylene glycol-modified deoxythymidines are resistant to nucleases and inhibit HIV-1 reverse transcriptase Reviewed International journal
H. Tateishi-Karimata, T. Muraoka, K. Kinbara, N. Sugimoto
ChemBioChem. 17 1399 - 1402 2016.8
Joint Work
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Novel one-tube-one-step real-time methodology for rapid transcriptomic biomarker detection: signal amplification by ternary initiation complexes Reviewed International journal
H. Fujita, Y. Kataoka, S. Tobita, M. Kuwahara, N. Sugimoto
Anal. Chem. 88 7137 - 7144 2016.6
Joint Work
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Real-time monitoring of G-quadruplex formation during transcription Reviewed International journal
T. Endoh, AB Rode, S. Takahashi, Y. Kataoka, M. Kuwahara, N. Sugimoto
Anal. Chem. 88 1984 - 1989 2016.2
Joint Work
Authorship：Lead author
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Reevaluation of the stability of G-quadruplex structures under crowding conditions Reviewed International coauthorship International journal
J. Zhou, H. Tateishi-Karimata, JL Mergny, M. Cheng, Z. Feng, D. Miyoshi, N. Sugimoto, C. Li
Biochimie. 121 204 - 208 2016.2
Joint Work
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Incorporation of O6-methylguanine restricts the conformational conversion of the human telomere G-quadruplex under molecular crowding conditions Reviewed International coauthorship International journal
A. Zhao, C. Zhao, H. Tateishi-Karimata, J. Ren, N. Sugimoto, X. Qu
Chem. Commum. 52 1903 - 1906 2016.1
Joint Work
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Nucleobase-modified PNA suppresses translation by forming a triple helix with a hairpin structure in mRNA in vitro and in cells [Selected as a cover art] Reviewed International coauthorship International journal
T. Endoh, D. Hnedzko, E. Rozners, and N. Sugimoto
Angew. Chem. Int. Ed. 55 899 - 903 2016
Joint Work
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Expansion of the DNA 'alphabet' beyond natural DNA recognition Reviewed International journal
H. Tateishi-Karimata and N. Sugimoto
ChemBioChem 17 1301 - 1303 2016
Joint Work
Authorship：Lead author
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A reversible B-A transition of DNA duplexes induced by synthetic cationic copolymers Reviewed International journal
N. Yamaguchi, Y. Zouzumi, N. Shimada, S. Nakano, N. Sugimoto, A. Maruyama, D. Miyoshi
Chem Commun (Camb). 52 7446 - 7449 2016
Joint Work
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Triplex-forming peptide nucleic acid modified with 2-aminopyridine as a new tool for ditection of A-to-I editing [Selected as a Back Cover] Reviewed International coauthorship International journal
C. Annoni, T. Endoh, D. Hnedzko, E. Rozners, N. Sugimoto
Chem Commun (Camb) 52 7935 - 7938 2016
Joint Work
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Mechanical insights into ribosomal progression overcoming RNA G-quadruplex from periodical translation suppression in cells Reviewed International journal
T. Endoh, N. Sugimoto
Sci. Rep. 6 22719 2016
Joint Work
Authorship：Lead author
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Use of a ureido-substituted deoxycytidine module for DNA assemblies Reviewed International journal
S. Nakano, H. Oka, M. Fujii and Sugimoto
Nucleosides Nucleotides Nucleic Acids 35 370 - 378 2016
Joint Work
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Pressure effect on the folding of G-quadruplex DNA modified with hexaethylene glycol Reviewed International journal
S. Takahashi and N. Sugimoto
Mol. Enz. Drug Targ. 2 3 2016
Joint Work
Authorship：Lead author
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Local thermodynamics of the water molecules around single-and double-stranded DNA studied by grid inhomogeneous solvation theory Reviewed International journal
M. Nakano, H. Tateishi-Karimata, S. Tanaka, F. Tama, O. Miyashita, S. Nakano, N. Sugimoto
Chemical Physics Letters 660 250 - 255 2016
Joint Work
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Triplex-forming PNA modified with unnatural nucleobases: the role of protonation entropy in RNA binding Reviewed International coauthorship International journal
T. Endoh, C. Annoni, D. Hnedzko, E. Rozners, N. Sugimoto
Phys. Chem. Chem. Phys. 18 32002 - 32006 2016
Joint Work
Authorship：Lead author
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Thermodynamic properties of water molecules in the presence of cosolute depend on DNA structure: a study using grid inhomogeneous solvation theory Reviewed International journal
M. Nakano, H. Tateishi-Karimata, S. Tanaka, F. Tama, O. Miyashita, S. Nakano, N. Sugimoto
Nucleic Acids Res. 43 10114 - 10125 2015.12
Joint Work
Authorship：Lead author
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Effects of background anionic compounds on the activity of the hammerhead ribozyme in Mg(2+)-unsaturated solutions Reviewed International journal
S. Nakano, Y. Kitagawa, D. Miyoshi, and N. Sugimoto
J. Biol. Inorg. Chem. 20 1049 - 1058 2015.9
Joint Work