Published Papers - SUGIMOTO Naoki

Preferential targeting cancer-related i-motif DNAs by the plant flavonol fisetin for theranostics applications

S. Takahashi, S. Bhattachargee, S. Ghosh, N. Sugimoto, and S. Bhowmik

Sci. Rep.   10   2504   2020  [Refereed]

Joint Work

New Modified Deoxythymine with Dibranched Tetraethylene Glycol Stabilizes G-Quadruplex Structures

H. Tateishi-Karimata, T. Ohyama, T. Muraoka, S. Tanaka, K. Kinbara, N. Sugimoto

Molecules   25 ( 707 )   2020  [Refereed]

Joint Work

Effect of Potassium Concentration on Triplex Stability under Molecular Crowding Conditions

Y. Teng, H. Tateishi-Karimata, T. Ohyama, N. Sugimoto

Molecules   ( 25 ) 387   2020

Joint Work

Pyrene modified thrombin binding aptamer analogues exhibit unique structural features

391. M. Kovačič, P. Podbevšek, H. Tateishi-Karimata, S. Takahashi, N. Sugimoto , J. Plavec

Nucleic Acids Res     2020  [Refereed]

Joint Work

Chemical biology of non-canonical structures of nucleic acids for therapeutic applications

H. Tateishi-Karimata, N. Sugimoto

Chem. Commun   in press   2020  [Refereed]

Joint Work

Thrombin binding aptamer G-quadruplex stabilized by pyrene-modified nucleotides

M. Kovačič, P. Podbevšek, H. Tateishi-Karimata, S. Takahashi, N. Sugimoto , J. Plavec

Nucleic Acids Res     2020  [Refereed]

Joint Work

Hydroxyl groups in cosolutes regulate the G-quadruplex topology of telomeric DNA

H. Tateishi-Karimata, D. Banerjiee, T. Ohyama, S. Matsumoto, D. Miyoshi, S. Nakano, N. Sugimoto

Biochem.Biophys. Res. Commun   523   2020  [Refereed]

Joint Work

Stabilization of DNA Loop Structures by Large Cations

S. Nakano, T. Ayusawa, Y. Tanino, N. Sugimoto

J Phys Chem B.   123   7687 - 7694   2019.09  [Refereed]

Joint Work

Conformational Dynamics of the RNA G-Quadruplex and its Effect on Translation Efficiency

T. Endoh and N. Sugimoto

Molecules   24   1613   2019.04  [Refereed]

Joint Work

RNA-Capturing Microsphere Particles (R-CAMPs) for Optimization of Functional Aptamers

T. Endoh, T. Ohyama, and N. Sugimoto

Small     1805062   2019.04  [Refereed]

Joint Work

Characterization of intracellular crowding environments with topology-based DNA quadruplex sensors

S. Takahashi, J. Yamamoto, A. Kitamura, M. Kinjo, and N. Sugimoto

Anal. Chem.   91 ( 4 ) 2586 - 2590   2019.02  [Refereed]

Joint Work

C-rich sequence in a non-template DNA strand regulates structure change of G-quadruplex in a template strand during transcription

Y. Teng, H. Tateishi-Karimata, and N. Sugimoto

Bull. Chem. Soc. Jpn.   92 ( 3 ) 527 - 577   2019  [Refereed]

Joint Work

In situ condensation of an anti-cancer drug into fibrin gel enabling effective inhibition of tumor cell growth

M. Kuwahara, H. Fujita, Y. Kataoka, Y. Nakajima, M. Yamada, N. Sugimoto

Chem Commun (Camb)   55   11679 - 11682   2019  [Refereed]

Joint Work

Bisubstrate function of RNA polymerases triggered by molecular crowding conditions

S. Takahashi, H. Okura, and N. Sugimoto

Biochemistry   58   1081 - 1093   2019  [Refereed]

Joint Work

Lighting up of thiazole orange on G-quadruplex DNA by high pressure

S. Bhowmik, S. Takahashi, and N. Sugimoto

ACS Omega   4   4325 - 4329   2019  [Refereed]

Single Work

Validation of the Nearest-neighbor Model for Watson–Crick Self-complementary DNA Duplexes in Molecular Crowding Condition

S. Ghosh, S. Takahashi, T. Endoh, H. Tateishi-Karimata, S. Hazra, N. Sugimoto

Nucleic Acids Res.   47   3284 - 3294   2019  [Refereed]

Joint Work

[Selected as a Supplementary Cover]

Design and Properties of Ligand-Conjugated Guanine Oligonucleotides for Recovery of Mutated G-Quadruplexes

S. Takahashi, B. Chelobanov, K. T. Kim, B. H. Kim, D. Stetsenko, and N. Sugimoto

Molecules   23   3228   2018.12  [Refereed]

Joint Work

Recovery of the formation and function of oxidized G-quadruplexes by a pyrene-modified guanine-tract

S. Takahashi, K. T. Kim, P. Podbevšek, J. Plavec, B. H. Kim, and N. Sugimoto

J. Am. Chem. Soc.   140 ( 17 ) 5774 - 5783   2018.04

Joint Work

DOI

Alkylating Probes for G-Quadruplex Structure and Evaluation of the Properties of the Alkylated G-Quadruplex DNA

N. Satoa, S. Takahashi, H. Tateishi-Karimata, M. E. Hazemi, T. Chikuni, K. Onizuka, N. Sugimoto and F. Nagatsugi

Org. Biomol. Chem.   140   642 - 651   2018.01

Joint Work

DOI

Cotranslational protein assembly imposes evolutionary constraints on homomeric proteins

E. Natan, T. Endoh, L. Haim-Vilmovsky, T. Flock, G. Chalancon, J. T. S. Hopper, B. Kintses, P. Horvath, L. Daruka, G. Fekete, C. Pál, B. Papp, E. Oszi, Z. Magyar, J. A. Marsh, A. H. Elcock, M. N. Babu, C. V. Robinson, N. Sugimoto, S. A. Teichmann

Nat Struct Mol Biol.   25   279 - 299   2018.01  [Refereed]

Joint Work

DOI