Published Papers - SUGIMOTO Naoki
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Stabilization of DNA Loop Structures by Large Cations
S. Nakano, T. Ayusawa, Y. Tanino, N. Sugimoto
J Phys Chem B. 123 7687 - 7694 2019.09 [Refereed]
Joint Work
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Conformational Dynamics of the RNA G-Quadruplex and its Effect on Translation Efficiency
T. Endoh and N. Sugimoto
Molecules 24 1613 2019.04 [Refereed]
Joint Work
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RNA-Capturing Microsphere Particles (R-CAMPs) for Optimization of Functional Aptamers
T. Endoh, T. Ohyama, and N. Sugimoto
Small 1805062 2019.04 [Refereed]
Joint Work
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Characterization of intracellular crowding environments with topology-based DNA quadruplex sensors
S. Takahashi, J. Yamamoto, A. Kitamura, M. Kinjo, and N. Sugimoto
Anal. Chem. 91 ( 4 ) 2586 - 2590 2019.02 [Refereed]
Joint Work
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C-rich sequence in a non-template DNA strand regulates structure change of G-quadruplex in a template strand during transcription
Y. Teng, H. Tateishi-Karimata, and N. Sugimoto
Bull. Chem. Soc. Jpn. 92 ( 3 ) 527 - 577 2019 [Refereed]
Joint Work
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In situ condensation of an anti-cancer drug into fibrin gel enabling effective inhibition of tumor cell growth
M. Kuwahara, H. Fujita, Y. Kataoka, Y. Nakajima, M. Yamada, N. Sugimoto
Chem Commun (Camb) 55 11679 - 11682 2019 [Refereed]
Joint Work
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Preferential targeting cancer-related i-motif DNAs by the plant flavonol fisetin for theranostics applications
S. Takahashi, S. Bhattachargee, S. Ghosh, N. Sugimoto, and S. Bhowmik
Sci. Rep. in press 2019 [Refereed]
Joint Work
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Validation of the Nearest-neighbor Model for Watson–Crick Self-complementary DNA Duplexes in Molecular Crowding Condition
S. Ghosh, S. Takahashi, T. Endoh, H. Tateishi-Karimata, S. Hazra, N. Sugimoto
Nucleic Acids Res. 47 3284 - 3294 2019 [Refereed]
Joint Work
[Selected as a Supplementary Cover]
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Bisubstrate function of RNA polymerases triggered by molecular crowding conditions
S. Takahashi, H. Okura, and N. Sugimoto
Biochemistry 58 1081 - 1093 2019 [Refereed]
Joint Work
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Lighting up of thiazole orange on G-quadruplex DNA by high pressure
S. Bhowmik, S. Takahashi, and N. Sugimoto
ACS Omega 4 4325 - 4329 2019 [Refereed]
Single Work
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Design and Properties of Ligand-Conjugated Guanine Oligonucleotides for Recovery of Mutated G-Quadruplexes
S. Takahashi, B. Chelobanov, K. T. Kim, B. H. Kim, D. Stetsenko, and N. Sugimoto
Molecules 23 3228 2018.12 [Refereed]
Joint Work
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Recovery of the formation and function of oxidized G-quadruplexes by a pyrene-modified guanine-tract
S. Takahashi, K. T. Kim, P. Podbevšek, J. Plavec, B. H. Kim, and N. Sugimoto
J. Am. Chem. Soc. 140 ( 17 ) 5774 - 5783 2018.04
Joint Work
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Alkylating Probes for G-Quadruplex Structure and Evaluation of the Properties of the Alkylated G-Quadruplex DNA
N. Satoa, S. Takahashi, H. Tateishi-Karimata, M. E. Hazemi, T. Chikuni, K. Onizuka, N. Sugimoto and F. Nagatsugi
Org. Biomol. Chem. 140 642 - 651 2018.01
Joint Work
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Cotranslational protein assembly imposes evolutionary constraints on homomeric proteins
E. Natan, T. Endoh, L. Haim-Vilmovsky, T. Flock, G. Chalancon, J. T. S. Hopper, B. Kintses, P. Horvath, L. Daruka, G. Fekete, C. Pál, B. Papp, E. Oszi, Z. Magyar, J. A. Marsh, A. H. Elcock, M. N. Babu, C. V. Robinson, N. Sugimoto, S. A. Teichmann
Nat Struct Mol Biol. 25 279 - 299 2018.01 [Refereed]
Joint Work
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Destabilization of DNA G-quadruplexes by chemical environment changes during tumor progression facilitates transcription
H. Tateishi-Karimata, K. Kawauchi, and N. Sugimoto
J. Am. Chem. Soc. 140 642 - 651 2018 [Refereed]
Joint Work
[Highligted as a Supplementary Cover]
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Crowding Shifts the FMN Recognition Mechanism of Riboswitch AptameConformational Selection to Induced Fi
A. B. Rode, T. Endoh, and N. Sugimoto
Angew. Chem. Int. Ed. 2018
Joint Work
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An anionic phthalocyanine decreases NRAS expression by breaking down its RNA G-quadruplex
K. Kawauchi, W. Sugimoto, T. Yasui, K. Murata, K. Itoh, K. Takagi, T. Tsuruoka, K. Akamatsu, H. Tateishi-Karimata, N. Sugimoto, and D. Miyoshi
Nat. Commun. 9 2271 2018 [Refereed]
Joint Work
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テトラエチレングリコールで修飾されたグアニン四重鎖の安定性の分子動力学計算による解析
大山達也, 建石寿枝, 田中成典, 杉本直己
日本核酸化学会誌 2 3 - 10 2018 [Refereed]
Joint Work
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Co-Transcriptional Molecular Assembly Results in a Kinetically Controlled Irreversible RNA Conformational Switch
T. Endoh and N. Sugimoto
Anal. Chem. 90 11193 - 11197 2018 [Refereed]
Joint Work
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Mirror-image Dependence: Targeting Enantiomeric G-quadruplex DNA by 10 Pairs of Triplex Metallohelices
C. Zhao, H. Song, P. Scott, A. Zhao, H. Tateishi-Karimata, N.Sugimoto, J. Ren, and X. Qu
Angew. Chem. Int. Ed. 57 15723 - 15727 2018 [Refereed]
Joint Work