Published Papers - SUGIMOTO Naoki

Stabilization factors affecting duplex formation of peptide nucleic acid with DNA

N. Sugimoto, N. Satoh, K. Yasuda and S. Nakano

Biochemistry   40   8444 - 8451   2001

Joint Work

pH and cation effects on the properties of parallel pyrimidine motif DNA triplexes

N. Sugimoto, P. Wu, H. Hara and Y. Kawamoto

Biochemistry   40   9396 - 9405   2001

Joint Work

Thermodynamic stability of base pairs between 2-hydroxyadenine and incoming nucleotides as a determinant of nucleotide incorporation specificity during replication

J. Kawakami, H. Kamiya, K. Yasuda, H. Fujiki, H. Kasai and N. Sugimoto

Nucleic Acids Res.   29   3289 - 3296   2001

Joint Work

Transition characteristics and thermodynamic analysis of DNA duplex formation: a quantitative consideration for the extent of duplex association

杉本　直己

Nucleic Acids Res., 28     4762 - 4768   2000.11

Single Work

Ribozyme-metal ion interaction

N. Sugimoto and T. Ohmichi

Rep. Prog. Poly. Phys. Jpn.   43   897 - 910   2000

Joint Work

Complexation of peptide with Cu2+ responsible to inducing and enhancing the formation of a-helix conformation

J. Zou and N. Sugimoto

BioMetals   13   349 - 359   2000

Joint Work

Development of small peptides recognizing a monosaccharide by combinatorial chemistry

N. Sugimoto, D. Miyoshi and J. Zou

Chem. Commun.     2295 - 2296   2000

Joint Work

Thermodynamics-structure relationship of single mismatches in RNA/DNA duplexes

N. Sugimoto, M. Nakano and S. Nakano

Biochemistry   39   11270 - 11281   2000

Joint Work

A role of the Trp-His interaction in the conformational switch between a-helix and b-sheet in short alanine-based peptides

J. Zou and N. Sugimoto

J. Chem. Soc., Perkin Trans.   2   2135 - 2140   2000

Joint Work

Effects of metal ions and catalytic loop sequences on the complex formation of a deoxyribozyme and its RNA substrate

Y. Okumoto and N. Sugimoto

J. Inorg. Biochem.   82   189 - 195   2000

Joint Work

In vitro selection of aptamers that act with Zn2+

J. Kawakami, H. Imanaka, Y. Yokota and N. Sugimoto

J. Inorg. Biochem.   82   197 - 206   2000

Joint Work

Kinetic property of bulged helix formation: analysis of kinetic behavior using nearest-neighbor parameters

T. Ohmichi, H. Nakamuta, K. Yasuda and N. Sugimoto

J. Am. Chem. Soc.   122   11286 - 11294   2000

Joint Work

RNA cleavage by a short catalytic DNA

杉本　直己

Rep. Prog. Poly. Phys. Jpn., 42     561 - 564   1999.11

Single Work

Thermodynamic stabilities of the short PNA/DNA hybrid duplexes

N. Sugimoto and N. Sato

Rep. Prog. Poly. Phys. Jpn.   42   569 - 572   1999

Joint Work

a-b structural transition of short oligopeptides by water/organic solvent titration

N. Sugimoto, J. Zou, H. Kazuta and D. Miyoshi

Chem. Lett.     637 - 638   1999

Joint Work

A novel screening method for combinatorial chemistry for low affinity interactions

N. Sugimoto, H. Kazuta, J. Zou and D. Miyoshi

Chem. Commun.     677 - 678   1999

Joint Work

Effect of metal ions and sequence of deoxyribozymes on their RNA cleavage activity

N. Sugimoto, Y. Okumoto and T. Ohmichi

J. Chem. Soc., Perkin Trans.   2   1381 - 1386   1999

Joint Work

Nucleic acid duplex stability: influence of base composition on cation effects

S. Nakano, M. Fujimoto, H. Hara and N. Sugimoto

Nucleic Acids Res.   27   2957 - 2965   1999

Joint Work

A selection of short peptides that interact with a porphyrin as a small target by immobilized phage display

J. Kawakami, T. Kitano, and N. Sugimoto

Chem. Commun.     1765 - 1766   1999

Joint Work

Development of new biotechnology for the 21st century (I) role of side-chain interactions of peptides in some neurodegenerative diseases

J. Zou and N. Sugimoto

Mem. Konan Univ., Sci. Ser.   46   49 - 60   1999

Joint Work