Papers - TAKAHASHI Shuntaro
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Improved nearest-neighbor parameters for the stability of RNA/DNA hybrids under a physiological condition. Reviewed
Dipanwita Banerjee, Hisae Tateishi-Karimata, Tatsuya Ohyama, Saptarshi Ghosh, Tamaki Endoh, Shuntaro Takahashi, Naoki Sugimoto
Nucleic acids research 2020.7
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Nearest-neighbor parameters for predicting DNA duplex stability in diverse molecular crowding conditions. Reviewed
Saptarshi Ghosh, Shuntaro Takahashi, Tatsuya Ohyama, Tamaki Endoh, Hisae Tateishi-Karimata, Naoki Sugimoto
Proceedings of the National Academy of Sciences of the United States of America 2020.6
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Thrombin binding aptamer G-quadruplex stabilized by pyrene-modified nucleotides. Reviewed International coauthorship
Matic Kovačič, Peter Podbevšek, Hisae Tateishi-Karimata, Shuntaro Takahashi, Naoki Sugimoto, Janez Plavec
Nucleic acids research 2020.2
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Preferential targeting cancer-related i-motif DNAs by the plant flavonol fisetin for theranostics applications. Reviewed International coauthorship
Shuntaro Takahashi, Snehasish Bhattacharjee, Saptarshi Ghosh, Naoki Sugimoto, Sudipta Bhowmik
Scientific reports 10 ( 1 ) 2504 - 2504 2020.2
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Validation of the nearest-neighbor model for Watson-Crick self-complementary DNA duplexes in molecular crowding condition Reviewed
S. Ghosh, S. Takahashi, T. Endoh, H. Tateishi-Karimata, S. Hazra, and N. Sugimoto
Nucleic Acids Research 47 ( 7 ) 3284 - 3294 2019.4
Joint Work
DOI： 10.1093/nar/gkz071
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Bisubstrate Function of RNA Polymerases Triggered by Molecular Crowding Conditions Reviewed
S. Takahashi, H. Okura, and N. Sugimoto
Biochemistry 58 ( 8 ) 1081 - 1093 2019.2
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Characterization of Intracellular Crowding Environments with Topology-Based DNA Quadruplex Sensors Reviewed
S. Takahashi, J. Yamamoto, A. Kitamura, M. Kinjo, and N. Sugimoto
Analytical Chemistry 91 ( 4 ) 2586 - 2590 2019.2
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Lighting Up of Thiazole Orange on G-Quadruplex DNA by High Pressure Reviewed International coauthorship
Bhowmik Sudipta, Takahashi Shuntaro, Sugimoto Naoki
ACS OMEGA 4 ( 2 ) 4325 - 4329 2019.2
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Design and Properties of Ligand-Conjugated Guanine Oligonucleotides for Recovery of Mutated G-Quadruplexes Reviewed International coauthorship
S. Takahashi, B. Chelobanov, K. T. Kim, B. H. Kim, D. Stetsenko, and N. Sugimoto
Molecules 23 ( 12 ) E3228 2018.12
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Recovery of the formation and function of oxidized G-quadruplexes by a pyrene-modified guanine-tract Reviewed International coauthorship
S. Takahashi, K. T. Kim, P. Podbevšek, J. Plavec, B. H. Kim, and N. Sugimoto
Journal of the American Chemical Society 140 ( 17 ) 5774 - 5783 2018.5
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Alkylating Probes for G-Quadruplex Structure and Evaluation of the Properties of the Alkylated G-Quadruplex DNA Reviewed
N. Sato, S. Takahashi, H. Tateishi-Karimata, M. E. Hazemi, T. Chikuni, K. Onizuka, N. Sugimoto, and F. Nagatsugi
Organic and Biomolecular Chemistry 16 ( 9 ) 1436 - 1441 2018.2
Joint Work
DOI： 10.1039/c7ob03179c
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Quantitative analysis of nucleic acid stability with ligands under high pressure to design novel drugs targeting G-quadruplexes Invited Reviewed
S. Takahashi, N. Sugimoto
Current Protocols in Nucleic Acid Chemistry 70 17.9.1 - 17.9.17 2017.9
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Topological impact of noncanonical DNA structures on Klenow fragment of DNA polymerase Reviewed
S. Takahashi, J. A. Brazier, N. Sugimoto
Proceedings of National Academy of Science of United States of America 114 ( 36 ) 9605 - 9610 2017.9
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Volumetric analysis of formation of the complex of G-quadruplex DNA with hemin using high pressure Invited Reviewed
S. Takahashi, S. Bhowmik, N. Sugimoto
Journal of Inorganic Chemistry 166 190 - 198 2017.1
Joint Work
Authorship：Lead author
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Volumetric contributions of loop regions of G-quadruplex DNA to the formation of the tertiary structure Invited Reviewed
S. Takahashi, N. Sugimoto
Biophysical Chemistry 2017
Joint Work
Authorship：Lead author
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Pressure effect on the folding of G-quadruplex DNA modified with hexaethylene glycol Invited Reviewed
S. Takahash, N. Sugimoto
Molecular Enzymology and Drug Targets 2016.4
Joint Work
Authorship：Lead author
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Real-time monitoring of G-quadruplex formation during transcription Reviewed
T. Endoh, A. B. Rode, S. Takahashi, Y. Karaoke, M. Kuwahara, N. Sugimoto
Analytical Chemistry 88 ( 4 ) 1984 - 1989 2016.2
Joint Work
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Pressure-dependent formation of i-motif and G-quadruplex DNA structures Reviewed
Shuntaro Takahashi, Naoki Sugimoto
Physical Chemistry Chemical Physics 17 ( 46 ) 31004 - 31010 2015.12
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In situ monitoring of structural changes during formation of 30S translation initiation complex by energy dissipation measurement using 27-MHz quartz-crystal microbalance Reviewed
Hiroyuki Furusawa, Yumi Tsuyuki, Shuntaro Takahashi, Yoshio Okahata
Analytical Chemistry 86 ( 11 ) 5406 - 5415 2014.6
Joint Work
DOI： 10.1021/ac500487b
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Effect of pressure on the stability of G-quadruplex DNA: thermodynamics under crowding conditions Reviewed
Shuntaro Takahashi, Naoki Sugimoto
Angewandte Chemie International Edition 52 ( 51 ) 13774 - 13778 2013.12