Papers - HONDA Daisuke
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Optimization of culture conditions of the thraustochytrid Aurantiochytrium sp. strain 18W-13a for squalene production Reviewed
Nakazawa A, Matsuura H, Kose R, Kato S, Honda D, Inouye I, Kaya K, Watanabe MM
Bioresource Technology 109 287 - 291 2012
Joint Work
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Optimization of biomass and fatty acid production by Aurantiochytrium sp. strain 4W-1b Reviewed
Nakazawa A, Matsuura H, Kose R, Ito K, Ueda M, Honda D, Inouye I, Kaya K, Watanabe MM
Procedia Environmental Sciences 15 27 - 33 2012
Joint Work
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Thraustochytrid Aurantiochytrium sp. 18W-13a accumulates high amounts of squalene. Reviewed
Kaya, K., Nakazawa, A., Matsuura, H., Honda, D., Inouye, I., and Watanabe, M. M.
Bioscience, Biotechnology and Biochemistry 75 ( 11 ) 2246 - 2248 2011.11
Joint Work
DOI： 10.1271/bbb.110430
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Detection of genes involved in fatty acid elongation and desaturation in thraustochytrid marine eukaryotes. Reviewed
Nagano, N., Sakaguchi, K., Taoka, Y., Okita, Y., Honda, D., Ito, M., and Hayashi, M.
Journal of Oleo Science 60 ( 9 ) 475 - 481 2011.8
Joint Work
DOI： 10.5650/jos.60.475
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Increase of eicosapentaenoic acid in thraustochytrids through thraustochytrid ubiquitin promoter-driven expression of a fatty acid ∆5 desaturase gene. Reviewed
Kobayashi, T., Sakaguchi, K., Matsuda, T., Abe, E., Hama, Y., Hayashi, M., Honda, D., Okita, Y., Sugimoto, S., Okino, N., and Ito, M.
Applied and Environmental Microbiology 77 ( 11 ) 3870 - 3876 2011.6
Joint Work
DOI： 10.1128/AEM.02664-10
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Increase of EPA in Thraustochytrids through Expression of a Fatty Acid 5 Desaturase Gene driven by the Thraustochytrid Ubiquitin Promoter
Takumi Kobayashi, Keishi Sakaguchi, Takanori Matsuda, Eriko Abe, Yoichiro Hama, Masahiro Hayashi, Daisuke Honda, Yuji Okita, Shinichi Sugimoto, Nozomu Okino, Makoto Ito
Journal of Biochemistry 2011.1
Joint Work
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The distribution of extracellular cellulase activity in marine eukaryotes, thraustochytrids. Reviewed
Nagano, N., Matsui, S., Kuramura, T., Taoka, Y., Honda, D., and Hayashi, M.
Marine Biotechnology 13 133 - 136 2011
Joint Work
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Optimization of culture conditions for growth and docosahexaenoic acid production by a marine thraustochytrid, Aurantiochytrium limacinum mh0186. Reviewed
Nagano, N., Taoka, Y., Honda, D., and Hayashi, M.
Journal of Oleo Science 58 ( 12 ) 623 - 628 2009.11
Joint Work
DOI： 10.5650/jos.58.623
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Olpidiopsis bostrychiae sp. nov.: an endoparasitic oomycete that infects Bostrychia and other red algae (Rhodophyta). Reviewed
Sekimoto, S., Klochkova, T. A., West, J. A., Beakes, G. W., and Honda, D.
Phycologia 48 ( 6 ) 460 - 472 2009.10
Joint Work
DOI： 10.2216/08-11.1
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Labyrinthulomycetes phylogeny and its implications for the evolutionary loss of chloroplasts and gain of ectoplasmic gliding. Reviewed
Tsui, C. K. M., Marshall, W., Yokoyama, R., Honda, D., Lippmeier, J. C., Craven, K. D., Peterson, P. D., and Berbee, M. L.
Molecular Phylogenetics and Evolution 50 ( 1 ) 129 - 140 2009.1
Joint Work
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Isolation and characterization of a ∆5-desaturase from Oblongichytrium sp. Reviewed
Kumon, Y., Kamisaka, Y., Tomita, N., Kimura, K., Uemura, H., Yokochi, T., Yokoyama, R., and Honda, D.
Bioscience, Biotechnology, and Biochemistry 72 ( 8 ) 2224 - 2227 2008.8
Joint Work
DOI： 10.1271/bbb.80235
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The development, ultrastructural cytology, and molecular phylogeny of the basal oomycete Eurychasma dicksonii, infecting the filamentous phaeophyte algae Ectocarpus siliculosus and Pylaiella littoralis. Reviewed
Sekimoto, S., Beakes, G. W., Gachon, C. M. M., Müller, D. G., Küpper, F. C., and Honda, D.
Protist 159 ( 2 ) 299 - 318 2008.4
Joint Work
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Taxonomy, molecular phylogeny, and ultrastructural morphology of Olpidiopsis porphyrae sp. nov. (Oomycetes, straminipiles), a unicellular obligate endoparasite of Bangia and Porphyra spp. (Bangiales, Rhodophyta). Reviewed
Sekimoto, S., Yokoo, K., Kawamura, Y., and Honda, D.
Mycological Research 112 ( 3 ) 361 - 374 2008.3
Joint Work
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Morphological and phylogenetic studies on unicellular diazotrophic cyanobacteria (cyanophytes) isolated from the coastal water around Singapore. Reviewed
Ohki, K., Kamiya, M., Honda, D., Kumazawa, S., and Ho, K. K.
Journal of Phycology 44 ( 1 ) 142 - 151 2008.1
Joint Work
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Taxonomic rearrangement of the genus Ulkenia sensu lato phylogeny based on morphology, chemotaxonomical characteristics and 18S rRNA gene (Thraustochytriaceae, Labyrinthulomycetes): emendation for Ulkenia and erection of Botryochytrium, Parietichytrium and Sicyoichytrium gen. nov. Reviewed
Yokoyama, R., Salleh, B., Honda, D.
Mycoscience 48 ( 6 ) 329 - 341 2007.12
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Squashed ball-like dsDNA virus infecting a marine fungoid protist Sicyoidochytrium minutum (Thraustochytriaceae, Labyrinthulomycetes).（共著）
Takao, Y., Nagasaki, K., Honda, D.
Aquatic Microbial Ecology 49 2007.11
Joint Work
Aquatic Microbial Ecology 49: 101-108 (2007).
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Proposal of Pseudochattonella verruculosa gen. nov., comb. nov. (Dictyochophyceae) for a formar raphidophycean alga Chattonella verruculosa, based on 18S rDNA phylogeny and ultrastructural characteristics. Reviewed
55 ( 3 ) 185 - 192 2007.8
Joint Work
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Molecular phylogeny of an unidentified Haliphthoros-like marine oomycete and Haliphthoros milfordensis inferred from nuclear-encoded small and large subunit rRNA genes and mitochondrial-encoded cox2 gene.（共著） Reviewed
Sekimoto, S., Hatai, K., Honda, D.
Mycoscience 48 48 212 - 221 2007.8
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Taxonomic rearrangement of the genus Schizochytrium sensu lato based on morphology, chemotaxonomical characteristics and 18S rRNA gene phylogeny (Thraustochytriaceae, Labyrinthulomycetes): emendation for Schizochytrium and erection of Aurantiochytrium and Oblongichytrium gen. nov.（共著） Reviewed
Yokoyama, R., Honda, D.
Mycoscience 48 ( 4 ) 199 - 211 2007.8
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Takao Y, Tomaru Y, Nagasaki K, Sasakura Y, Yokoyama R, Honda D.
Plankton and Benthos Research 2 ( 2 ) 91 - 97 2007.5